Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890569.1_cds_XP_016445316.1_40287
CDS Infomation

[gene=LOC107770510] [db_xref=GeneID:107770510] [protein=probable protein phosphatase 2C 38] [protein_id=XP_016445316.1] [location=complement(join(34808..35032,35363..35599,35714..36081,36727..37027))] [gbkey=CDS]
Sequence

ATGGTTACATTGTGCTGGAGACCTTCTGTAAAGGGGGATGGTAGTAAGCGAGGAGGAGAT
ACGAATGGGAGGTTTGATGGATTAATGTGGTATAAGGATCTTGGAGTTCATACAAATGGA
GAATTTTCCATGGCAGTGATACAAGCCAATAATTTGATGGAGGATCGGAGTCAGCTCGAA
TCAGGGCCATTGAGTTCTCTTAAATCAGGACCTCATGGAACATTTATAGGAGTTTATGAT
GGACATGGAGGACCAGAGACATCGCGGTTTATAAACAAAACTCTGTTCTCCAATCTCAAG
AAATTTACATCAGAGCATCAAGAAATTTTTGCTGATGCAATAAGGAAAGCTTTCTTGACA
ACTGAAGAGGAGTTTCTGTCACTTGTAAAGCAACAGTGGAATGAGAAGCCACAGATTGCA
TCAGTAGGATCATGCTGTTTGGCGGGCACAATATGCAATGGACTACTATATATCGCGAAT
GTAGGAGATTCGCGTGCAGTACTAGGTAGAGTAGATAAAGCTACAAAGAGTATAACAGCT
ATTCAATTGTCAACAGAGCATAATGCTAGTATTGAGTCTGTAAGAGATGAACTTCGCTCG
TTGCATCCTCAGGATTCGCGAATTGTTGTTCTCAAACACAAAGTTTGGCGTGTGAAAGGT
CTCATACAGGTTTCAAGGTCAATTGGTGATGCCTATCTTAAGAAGTCGGAGTTCAACCAA
GCACCATTATTGGCAAGATTTAGGTTGCCTGAACCCTTCTCGAAACCAATCCTCAGCGCG
GAGCCATCAATATCCGTTCACAGACTCAGTTCCAAAGATCAATTCGTCATATTTGCTTCA
GATGGTCTATGGGATCATCTTAGCAACGAGGAGGCTGTTGATATTGTCCACACTCATCCT
AGAAATGGAATTGCTAGAAGACTTATTGAAGCTGCTCTACATGTAGCTGCCAAGAAAAGA
GAAATGCGATATTCAGACCTAATGAAGATTGATCGAGGCGTAAGAAGGCATTTCCATGAT
GATATTACAGTTGTAATTGTGTTTGTTGATCCATATTCCATGAATAGAAGTTCTTCTCGT
GGTTCAATTATTTCCCTTAGAGGAGGTACTCCCTCCTCCCCAGAGTCCTAA

Peptide Sequence

PEP ID

XP_016445316.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 38 [Nicotiana tabacum]
Sequence

MVTLCWRPSVKGDGSKRGGDTNGRFDGLMWYKDLGVHTNGEFSMAVIQANNLMEDRSQLE
SGPLSSLKSGPHGTFIGVYDGHGGPETSRFINKTLFSNLKKFTSEHQEIFADAIRKAFLT
TEEEFLSLVKQQWNEKPQIASVGSCCLAGTICNGLLYIANVGDSRAVLGRVDKATKSITA
IQLSTEHNASIESVRDELRSLHPQDSRIVVLKHKVWRVKGLIQVSRSIGDAYLKKSEFNQ
APLLARFRLPEPFSKPILSAEPSISVHRLSSKDQFVIFASDGLWDHLSNEEAVDIVHTHP
RNGIARRLIEAALHVAAKKREMRYSDLMKIDRGVRRHFHDDITVVIVFVDPYSMNRSSSR
GSIISLRGGTPSSPES

Transcript Sequence

Gene sequence data has not been registered.